Manually curated genes
How to transfert your manually curated genes ?
CONTACTS
- Questions about gene annotation and recipients of the file: Hélène Rimbert , Frédéric Choulet .
- Questions about the browser and the website: Michael Alaux , Nicolas Francillonne .
GUIDELINES
- The manually curated genes must be transfered in GFF3 format following The Sequence Ontology specifications. See description here .
- Please make sure your GFF3 file contains at least gene/mRNA/exon/CDS features with uniq ID and Parent attributes. The only case where an ID is not necessary concerns CDS & CDS features if they have Parent attribute defined.
- All attributes and feature types are case sensitive! i.e. Id is not the same as ID.
- Please make sure the chromosome names you are using are the same as the official release IWGSC RefSeq v1 annotations and sequences.
- Please, be as precise and complete as possible. Every feature which is not described in your annotation compared to the previous one will be lost.
- Once transfered, your file will be validated and added to the browser in the next release.
DOWNLOAD
example_of_minimal_gff3.txt (1.90 kB)
Update: 02 May 2022
Creation date: 02 Jan 2019
Creation date: 02 Jan 2019
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eZ PublishPublication supervisor: A-F. Adam-Blondon
Read Credits & General Terms of Use