FEEDBACK  |  CONTACT  |  SITE MAP   
Please ask an URGI account
WHEAT URGI

Seq Repository

You are here : Home / Home Wheat / Seq Repository / Access Status

Access Status

  Data access agreement  
  Open acess
  		General access Project team data access Contacts Publication
IWGSC RefSeq v2.1 assembly and annotation Download, BLAST and browser x     IWGSC, Mingcheng Luo and Jan Dvorak Zhu et al., DOI: https://doi.org/10.1111/tpj.15289
IWGSC RefSeq v2.0 assembly Download, BLAST x     IWGSC, Mingcheng Luo and Jan Dvorak  
IWGSC RefSeq v1.0 assembly Download, BLAST and browser x     IWGSC  
IWGSC RefSeq v1.0 annotation Download and browser x     IWGSC  
IWGSC RefSeq v1.1 annotation Download and browser x     IWGSC  
IWGSC WGA v0.4 Download and BLAST x     IWGSC  
IWGSC Survey sequence v1 & v2 assemblies Download and BLAST x     IWGSC

IWGSC,

PMID:25035500

A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome

Science

 

 

 

 

 

 

  Genome Zipper (v5) x     Mihaela Martis, Klaus Mayer
Gene models (nov13) x     Manuel Spannagl, Klaus Mayer
POPSEQ x     Nils Stein
Browser x     IWGSC, Curtis Pozniak, Eduard Akhunov
IWGSC Survey sequence v3 assembly Dowload and browser x     Andy Sharpe, David Konkin and Curtis Pozniak  
Other wheat species WGS assemblies Download and BLAST x     Jon Wright, Mario Caccamo  
RNA-Seq (oriented and non-oriented) Download x     Lise Pingault, Etienne Paux  
Transcriptome Graingenes Download x     Jorge Dubcovsky Krasileva et al., PMID:23800085
Variations GBS and WEC Download x     Eduard Akhunov Jordan KW et al., DOI: https://doi.org/10.1186/s13059-015-0606-4
IWGSC SNPs Download x     Etienne Paux Rimbert et al., DOI: https://doi.org/10.1371/journal.pone.0186329
Varietal SNPs Download and browser x     Jorge Dubcovsky, Eduard Akhunov  
3B reference sequence assembly and annotation Download, BLAST and browser x     Frédéric Choulet, Etienne Paux

Choulet et al.,

PMID:25035497

Structural and functional partitioning of bread wheat chr. 3B

Science

 

Physical map browser 1AS v1 and v2 x     James Breen, Thomas Wicker, Beat Keller Breen et al., PMID:24278269
  1AL v1 and v2 x     Stuart Lucas, Hikmet Budak Lucas et al., PMID:23613713
2AS x     Kuldeep Singh  
2AL x     Kuldeep Singh  
3AS v1 x     Sunish Sehgal, Bikram Gill  
3AS v2 x     Sunish Sehgal, Bikram Gill  
3AL x     Vijay Kumar Tiwari  
4AS x     Miroslav Valarik, Jaroslav Dolezel  
4AL v1 x     Miroslav Valarik, Jaroslav Dolezel  
4AL v2 x     Miroslav Valarik, Jaroslav Dolezel, Michael Abrouk  
5AL x     Simone Scalabrin  
5AS x     Simone Scalabrin  
6AL x     Naser Poursarebani  
6AS x     Naser Poursarebani  
7AL x     Gabriel Keeble-Gagnere  
7AS x     Gabriel Keeble-Gagnere  
1BS v1, v2,v3 and v5 x     Dina Raats, Zeev Frenkel, Abraham Korol Raats et al., PMID:24359668
1BL v1 and v2 x     Etienne Paux Philippe et al., PMID:23800011
2BL x     John Jacobs  
2BS x     John Jacobs  
3B x     Etienne Paux Paux et al., PMID:18832645
4BL x     John Jacobs  
4BS x     John Jacobs  
5BL x     John Jacobs  
5BS x     Elena Salina  
6BS v1 and v2 x     Fuminori Kobayashi, Hirokazu Handa Tanaka et al., PMID:24086083
6BL v1 and v2 x     Fuminori Kobayashi, Hirokazu Handa
7B x     Tatiana Belova, Odd-Arne Olsen  
1D x     Bikram Gill, Sunish Sehgal, Vijay Kumar Tiwari  
2DL x     John Jacobs  
2DS x     John Jacobs  
3DS v1 x     Jan Bartos, Jaroslav Dolezel  
3DS v2 x     Jan Bartos, Jaroslav Dolezel Bartos et al.,
PMID:28724077 DOI:10.3835/plantgenome2017.03.0021
3DL x     Jon Wright, Mario Caccamo, Mike Bevan  
4D x     Bikram Gill, Sunish Sehgal, Vijay Kumar Tiwari  
5DL x     John Jacobs  
5DS x     Hikmet Budak, Bala Ani Akpinar Bala Ani Akpinar et al., PMC4465308
6D x     Bikram Gill, Sunish Sehgal, Vijay Kumar Tiwari  
7DL x     Song Weining, Wang Le  
7DS x     Hana Simkova, Jaroslav Dolezel

 

 

Update: 27 Apr 2021
Creation date: 23 Apr 2014